[Zubersoft]

Did you select the option to embed the annotations in the PDF itself or are you saving them normally in MobileSheetsPro? If you go to into the annotation settings and you enable the option to allow editing of embedded PDF annotations, do those annotations suddenly appear? If we can't find an easy solution, I'll need to continue this conversation with you over email so that you can send me additional details and potentially files. I may need you to export the song as a .msf so that I can import it and observe what you are seeing.

Thanks,
Mike